Computer Science Department
University of Illinois at Urbana-Champaign

CS591-BIO Advanced seminar in biomedical informatics (Fall 2007)

This is a very tentative schedule of talks. The order of talks will be revised heavily as the semester progresses.

Date Speaker Topic
8/24 - Organizational meeting
8/31 Saurabh Sinha Probabilistic alignment of regulatory modules
9/7Wen-Ting Lin
9/14Majid KazemianFusion methods for secondary structure prediction
9/21Ruth KantorovitzAlignment-free sequence comparison
9/28Jiawei HanMining, Indexing, and Searching Graphs in Large Biological Data Sets
10/5Julia HockenmaierWhat parsing algorithms can tell us about protein folding
10/11
(4PM, 2 Illini Hall)
Haiyan HuangGene Expression/Function Similarity Inferences
10/19John MacMullenMeasuring curator annotation variation in model organism databases
10/26Xu LingEfficient Identification of Conserved Gene Clusters Across Multiple Genomes with Decomposition-Filtering
11/2Xin HeEvolutionary model based approach to regulatory sequence alignment and annotation
11/9Younhee Kim
11/16
11/30Jaebum KimEvolution of regulatory sequences
12/7Ryan CunninghamThe poplar genome project

Tentative list of papers to be presented

Tentative list of Speakers




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